Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921246.1_cds_XP_016470242.1_62715
CDS Infomation

[gene=LOC107792535] [db_xref=GeneID:107792535] [protein=protein NRT1/ PTR FAMILY 6.3-like] [protein_id=XP_016470242.1] [location=join(32729..32846,33050..33227,33362..33401,34003..34571,35154..36027)] [gbkey=CDS]
Sequence

ATGGACCTTCCCCAGACACAACAAGATACAAAATCTATTCCAGATGCCTGGGATTACAAA
GGGCGACCTGCTCTTAAATCACTCTCTGGTGGTTGGGCTAGTTCCGCCATGATTTTAGGG
GTTGAGGCAGTGGAGAGGCTAGTAACACTAGGCATTGCTGTAAACCTGGTGGTGTACTTG
ACTAAAACCATGCACTTGGGCAATGCTAACGCCGCAAACATTGTTACTAACTTTATGGGA
ACTTCTTATATCCTTACTTTGCTTGGCGGCTACATTGCTGACACTTTCATCGGAAGGTAT
CTTACCATTGGCATCTTCGCCACTGTTCAAGCTATAGGTGTCACAATTTTGACAATATCC
ACCATAATCCCAAGCCTACGACCTCCAAAATGTGAACTAGGAAGCTCAACATGCATCCCA
GCAAGCGGCAAACAACTCGCCGTCCTTTACACCGCCCTATACATGACGGCTCTAGGCACC
GGCGGCTTAAAATCCAGCGTCTCCGGCTTCGGTTCCGACCAATTCGACGATTCCGACAAA
AAGGAAAGAGGCCAGATGATAAAATTCTTCAGCTGGTTCTTTTTCTTAATAAACGTAGGA
GCGCTAGCTGCAGTGACAGTACTAGTTTACATTCAGGATAAAGTGGGAAGGGAATGGGGT
TATGGTATATGCGCTTGTGCTATTATTGTTGGACTTATCGTGTTCTTGACTGGCACAAAG
AATTATCGTTTCAAGAAACTTGTAGGGAGTCCATTGACCCAAATTGCTTCAGTGTTTGTT
GCTGCTTGGAGGAAAAGGCATCTGAAATTGCCATCTGATTCCTCTTTTCTAATCACTGTT
GATGATATTATTGGGGAAGATAACAAAAAGAATAAACAGCAGTTGCCTCACAGCAAGGAG
TTCCGTTTCTTGGACAAGGCAGCTATTAAAGAAGATGACAGTGAATTTTCTGGGACAACC
ATATTGAATAACTGGAATTTAGCAACTTTAACCGATGTTGAAGAAGTTAAATTGGTAATC
AGAATGTTACCAACATGGGGTACGACCATTATGTTCTGGACTGTCTATGCTCAAATGACA
ACATTTTCCGTGTCACAAGCTACTACAATGAACCGTCATATTGGTAAATCCTTTGAAATT
CCAGCTGCCTCACTCACTGCTTTCTTTGTTGGAAGTATTCTTTTGATGATTATTTTCTAC
GATCGGATCATGGTTCCAATTTGTCGTCGATTCTTGAACAATCCACACGGTTTCACCCCG
TTGCAACGTATTGCTATAGGCCTAGTCAGTTCAATTTTTGCAATGATAGCCGCTGCTTTA
ACAGAAGTGAAAAGATTGAAGGTTGCGAAATTACACGGATTGACAAACGATCAGAATGCT
ATAATTCCTATGAGTGTGTTTTGGTTAGTCCCACAATTCTTGCTTGTTGGTGGAGGTGAA
GCTTTTACTTATATTGGGCAACTTGATTTTTTCTTAAGGGAATGTCCTAAAGGGATGAAG
ACTATGAGTACAGGCTTGTTTATAAGCACAATTTCATTAGGATTTTTCTTTAGTTCAATT
TTGGTCACAATTGTGGATAAGGTGACTGGAAAAACAAAGCCATGGTTAGCTGATAATTTG
AACAAAGGAAAGCTCTATGATTTCTACTGGCTTTTGGCAATATTGAGTGTTTTGAATTTG
ATGGTATTCTTGTTTTGTTCAAGACGATATGTGTACAAGGAAAAGAGGCTGGCTGAAGTG
GGGATTGAAATGGAGGAGTCGGACCCAGTTTGCCATTAA

Peptide Sequence

PEP ID

XP_016470242.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 6.3-like [Nicotiana tabacum]
Sequence

MDLPQTQQDTKSIPDAWDYKGRPALKSLSGGWASSAMILGVEAVERLVTLGIAVNLVVYL
TKTMHLGNANAANIVTNFMGTSYILTLLGGYIADTFIGRYLTIGIFATVQAIGVTILTIS
TIIPSLRPPKCELGSSTCIPASGKQLAVLYTALYMTALGTGGLKSSVSGFGSDQFDDSDK
KERGQMIKFFSWFFFLINVGALAAVTVLVYIQDKVGREWGYGICACAIIVGLIVFLTGTK
NYRFKKLVGSPLTQIASVFVAAWRKRHLKLPSDSSFLITVDDIIGEDNKKNKQQLPHSKE
FRFLDKAAIKEDDSEFSGTTILNNWNLATLTDVEEVKLVIRMLPTWGTTIMFWTVYAQMT
TFSVSQATTMNRHIGKSFEIPAASLTAFFVGSILLMIIFYDRIMVPICRRFLNNPHGFTP
LQRIAIGLVSSIFAMIAAALTEVKRLKVAKLHGLTNDQNAIIPMSVFWLVPQFLLVGGGE
AFTYIGQLDFFLRECPKGMKTMSTGLFISTISLGFFFSSILVTIVDKVTGKTKPWLADNL
NKGKLYDFYWLLAILSVLNLMVFLFCSRRYVYKEKRLAEVGIEMEESDPVCH

Transcript Sequence

Gene sequence data has not been registered.